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研究論文 (Major Publications)

(最近の主な論文,年代順にさかのぼる)
<2017>

Ohshima K
, Okamura K, Yasaka R, Fukuda S, Ishimaru K, Tomitaka Y, Yamashita K. 2017. First genome sequence of shallot latent carlavirus from Allium macrostemon Bunge. Genome Announcements, Aug 17;5(33). pii: e00809-17. doi: 10.1128/genomeA.00809-17.

臼井彩夏・一瀬大樹・上田敏久・福田伸二・
大島一里・松尾洋介・田中 隆・ 中山秀幸・ 石丸幹二. 2017. ノビル鱗茎の成分解析.日本食品化学学会誌、Vol. 24(2), 63-68.

Yasaka R, Fukagawa H, Ikematsu M, Soda H, Korkmaz S, Golnaraghi A, Katis N, Ho SYW, Gibbs A J, Ohshima K. 2017. The time of emergence and spread of turnip mosaic virus. Scientific Reports, 7: 4240, DOI:10.1038/s41598-017-01934-7.

Wylie SJ, Adams M, Chalam C, Kreuze J, López-Moya J, Ohshima K, Praveen S, Rabenstein F, Stenger D, Wang A, Zerbini FM, ICTV Consortium 2017. ICTV Virus Taxonomy Profile: Potyviridae. Journal of General Virology, 98, 352-354


Usui A, Matsuo Y, Tanaka T, Ohshima K, Fukuda S, Ishimaru K. 2017. Phenolic constituents from Allium macrostemon Bunge. Natural Medicine Note, 71, 51-52.

Gibbs A, Ohshima K
, Yasaka R. Mohammadi M, Gibbs M. Jones R. 2017. The phylogenetics of the global population of potato virus Y and its necrogenic recombinants. Virus Evolution, 3(1), vex002. doi:10.1093/ve/vex002

Usui A., Y. Matsuo, T. Tanaka, K. Ohshima
, S. Fukuda, T. Mine, H. Nakayama, K. Ishimaru, 2017. Ferulic acid esters of oligo-glucose from Allium macrostemon. Natural Product Communications, 12, 89-91.

Usui A, Matsuo Y, Tanaka T, Ohshima K, Fukuda S, Mine T, Yakashiro I, Ishimaru K. 2017.
Ferulic acid esters of glucosylglucose from Allium macrostemon Bunge. Journal of Asian Natural Products Research, Sept, DOI: 10.1080/10286020.2016.1213722

<2016>
Ohshima K, Nomiyama R, Mitoma S, Honda Y, Yasaka R, Tomimura K. 2016. Evolutionary rates and genetic diversities of mixed potyviruses in Narcissus. Infection, Genetics and Evolution, 45, Sept, 213-223.

Ohshima K, Korkmaz S, Mitoma S, Nomiyama R, Honda Y. 2016. First genome sequence of wild onion symptomless virus, a novel member of potyvirus in the turnip mosaic virus phylogenetic group. Genome Announcements, 4 (4), July/August, e00851-16.

Ohshima K.
2016. Spatial and temporal evolution of potyviruses. 12th PSJ Plant Virus Disease Workshop, 12, March, 17-22.

Wylie SJ, Adams MJ, Kreuze JF, Lopez-Moya JJ,
Ohshima K, Rabenstein F, Stenger DC, Wang A, Zerbini FM, 2015. ICTV taxonomic proposal 2015.002aP.A.v2.Poacevirus. Create species Caladenia virus A in the genus Poacevirus, family Potyviridae. Jan,
http://www.ictvonline.org/proposals-15/2015.002aP. A.v2.Poacevirus.pdf

Ohshima K
, Muraoka S, Yasaka R, Adachi S, Tokuda M. 2016. First report of Scallion mosaic virus on wild Japanese garlic (Allium macrostemon) in Japan.
Journal of General Plant Pathology, 82(1), Jan, 61-64.

Matsumoto K, Yasaka R, Setoyama T, Kawano S, Ohshima K. 2016. Chilli pepper rugose mosaic disease caused by Pepper veinal mottle virus occurs on Ishigaki Island, Japan. Journal of General Plant Pathology, 82(1), Jan, 57-60.

Ohshima K, Matsumoto K, Yasaka R, Nishiyama M, Soejima K, Korkmaz S, Ho SYW, Gibbs AJ, Takeshita M. 2016. Temporal analysis of reassortment and molecular evolution of Cucumber mosaic virus: Extra clues from its segmented genome, Virology, 487, Jan, 188-197.

He Z, Yasaka R, Li W, Li S, Ohshima, K. 2016. Genetic structure of populations of sugarcane streak mosaic virus in China: Comparison with the populations in India. Virus Research, 211, Jan, 103-116.

<2015>
大島一里, 2015. 植物ウイルスの拡散:農業史及び人類移動との時間的関連. ウイルス 65:(2) 12月 229-238.

Gibbs AJ, Wood J, Garcia-Arenal F, Ohshima K, Armstrong JS. 2015. Tobamoviruses have probably co-diverged with their eudicotyledonous hosts for at least 110 million years. Virus Evolution, 1(1): vev019. Dec.


大島一里, 2015. カブモザイクウイルス. 日比忠明・大木理編. 植物ウイルス大事典. 朝倉書店. pp.905. 11月

大島一里, 2015.
カブモザイクウイルスの起源と拡散年代:種の壁を乗り越えて. 植物防疫. 69巻 (12), 810-813.

Yasaka R, Ohba K, Schwinghamer MW, Fletcher J, Ochoa-Corona FM, Thomas JE, Ho SYW, Gibbs A J, Ohshima K. 2015. Phylodynamic evidence of the migration of turnip mosaic potyvirus from Europe to Australia and New Zealand. Journal of General Virology, 96, March, 701-713.

Gibbs A J, Nguyen HD, Ohshima K. 2015. The 'emergence' of turnip mosaic virus was probably a 'gene-for-quasi-gene' event. Current Opinion in Virology, 10, Jan, 20-26.

<2014>
Musić MŠ, NguyenHD, ČerniS. Mamula ð., Ohshima K. ŠkorićD, 2014. Multilocus sequence analysis of 'Candidatus Phytoplasma asteris' strain and the genome analysis of Turnip mosaic virus coinfecting oilseed rape. Journal of Applied Microbiology. 117, Sept, 774-785.

Rabenstein F, Adams MJ, Kreuze, JF, Lopez-Moya JJ,
Ohshima K, et al, 2014. ICTV taxonomic proposal 2014.005aP.A.v1. Tritimovirus_sp. Create 1 new species inthe genus Tritimovirus, family Potyviridae.

He Z, Li W, Yasaka R, Huang Y, Zhang Z, Ohshima K, Li and S, 2014. Molecular variability of Sugarcane streak mosaic virus in China based on an analysis of the P1 and CP protein coding regions. Archives of Virology, May;159(5):1149-54.


Yasaka R, Nguyen HD, Ho SYW, Duchene S, Korkmaz S, Katis N, Takahashi H, Gibbs A, Ohshima K, 2014. The temporal evolution and global spread of Cauliflower mosaic virus, a Plant Pararetrovirus. PLoS ONE, 9(1), Jan, e85641.

<2013>
小川哲治・眞岡哲夫・
大島一里, 2013. 本邦のジャガイモYウイルス系統について. 植物防疫. 2013(11), Nov, 623-630.

Ohshima, K. 2013. Studies on the molecular evolution of potyviruses. Journal of General Plant Pathology, 79 (6), Nov, 448-452.

大島一里, 2013. ポティウイルスの分子進化学的研究. 日本植物病理学会報 79(3), Aug, 135-138. (Studies on the molecular evolution of potyviruses. JGPPの和訳版)

Ogawa, T., S. Nakamura, M. Sayama and K. Ohshima, 2013. Attenuated mutants of Potato virus Y necrotic strain produced by nitrous acid treatment and mutagenesis-in-tissue culture methods. European Journal of Plant Pathology, 135, April, 745-760. 10.1007/s10658-012-0115-1

Nguyen, H. D., Y. Tomitaka, S. Y. W. Ho, S. Duchene, H-J. Vetten, D. Lesemann, J. A. Walsh, A. J. Gibbs and K. Ohshima. 2013. Turnip mosaic potyvirus probably first spread to Eurasian brassica crops from wild orchids about 1000 years ago.
PLoS ONE, 8(2), Feb, e55336. doi:10.1371/journal.pone.0055336.

Nguyen, H. D., H. T. N. Tran and K. Ohshima, 2013. Genetic variation of the Turnip mosaic virus population of Vietnam: A case study of founder, regional and local influences. Virus Research, 171, Jan, 138-149.

Hayashi, N., Y. Akiyoshi, Y. Kobayashi, K. Kanda, K. Ohshima and M. Goto. 2013. Inactivation characteristics of Bacillus thuringiensis spore in liquid using atmospheric torch plasma using oxygen. Vacuum, 88, Feb, 173-176.

<2012>

大島一里, 2012. 植物感染性ポティウイルスの進化;集団遺伝構造の調査ウイルス.62, 151-160.

Pourrahim, R., Golnaraghi, A., Farzadfar, Sh. and
K. Ohshima, 2012. Partial biological and molecular characterization of Tomato yellow fruit ring virus isolates from potato. The Plant Pathology Journal, 28, 390-400.

Ogawa, T., A. Nakagawa, T. Hataya and
K. Ohshima. 2012. The genetic structure of populations of Potato virus Y in Japan; based on the analysis of 20 full genomic sequences. Journal of Phytopathology, 160, 661–673.

Fukumoto, T., M. Nakamura,
K. Ohshima and H. Iwai, 2012. Genetic structure and variability of East Asian Passiflora virus population in Amami-O-shima, Japan. Journal of Phytopathology, 160, 404-411.

Takeshita, M., E. Koizumi, M. Noguchi, K. Sueda, H. Shimura, N. Ishikawa, H. Matsuura,
K. Ohshima, T. Natsuaki, S. Kuwata, N. Furuya, K. Tsuchiya and C. Masuta, 2012. Infection dynamics in viral spread and interference under the synergism between Cucumber mosaic virus and Turnip mosaic virus. Molecular Plant-Microbe Interactions, 25, 19-27.


Ohshima, K., 2012.New editorial office. Journal of General Plant Pathology, 1.

<2011>

小川哲治・仲川晃生・大島一里, 2011. 鹿児島県奄美地方の塊茎えそ病を示すジャガイモから分離したジャガイモウイルスのゲノム構造. 九州病害虫研究会報. 57, 19-25.

<2010>
Ho, T., L. Wang, L. Huang, Z. Li, D. W. Pallett, T. Dalmay, K. Ohshima, J. A. Walsh and H. Wang. 2010. Nucleotide bias of DCL and AGO in plant anti-virus gene silencing. Protein & Cell, 1, 847-858.<Link>

Gibbs, A. J. and
K. Ohshima, 2010. Potyviruses and the digital revolution. Annual Review of Phytopathology. 48, 205-223.<Link>

Yamasaki, S., J. Sakai, S. Fuji, S. Kamisoyama, K. Emoto,
K. Ohshima and K. Hanada. 2010. Comparisons among isolates of Sweet potato feathery mottle virus using complete genomic RNA sequences. Archives of Virology, 155, 795-800.<Link>

Ohshima, K., S. Akaishi, H. Kajiyama, R. Koga and A. J. Gibbs, 2010. The evolutionary trajectory of turnip mosaic virus populations adapting to a new host. Journal of General Virology, 91, 788-801.<Link> <Media released by The Society of General Microbiology> <ScienceDaily> <Softpedia>

<2009>
Seo, J-K.,
K. Ohshima, H-G. Lee, M. So, H-S. Choi, S-H. Lee, S-H. Sohn and K-H. Kim, 2009. Molecular variability and genetic structure of the population of Soybean mosaic virus based on the analysis of complete genome sequences. Virology, 393, 91-103. <Link>

大島一里, 2009. ポティウイルスの進化生態と宿主特異性. 植物-病原体相互作用の理解に基づく病害制御の新視点. 植物感染生理談話会論文集. 45, 64-74.

Farzadfar, S., Y. Tomitaka, M. Ikematsu, A. R. Golnaraghi, R. Pourrahim and
K. Ohshima, 2009. Molecular characterization of Turnip mosaic virus isolates from Brassicaceae weeds. European Journal of Plant Pathology, 124, 45-55. <Link>


大島一里, 2009. カブモザイクウイルスの分子進化と生態. 植物防疫, 63巻(1): 21-25.

<2008>
Korkmaz, S., Y. Tomitaka, S. Onder and
K. Ohshima, 2008. Occurrence and molecular characterization of Turkish Isolates of Turnip mosaic virus. Plant Pathology, 57, 1155-1162. <Link>

大島一里, 2008. ゲノム情報から追跡した植物ウイルスの進化・生態・拡散. 神戸植物防疫情報, 989号.

小川哲治・仲川晃生・佐山 充・
大島一里, 2008. ジャガイモ塊茎えそ病の発生生態と防除. 植物防疫 62巻(9): 481-484.

Gibbs, A. J.,
K. Ohshima, M. J. Phillips and M. Gibbs, 2008. The prehistory of potyviruses: their initial radiation was during the dawn of agriculture. PLoS ONE, 3(6) , 1-11, e2523. <Link> <Listed as 'New and Exciting in PLoS ONE'>

Gibbs, A. J., M. Gibbs, K. Ohshima and F. Garcia-Arenal, 2008.
More about plant virus evolution; past, present and future. Origin and evolution of viruses 2nd Edition. Domingo, E., Parrish, C. R. and Holland, J. J. eds. Elsevier, 229-249. pp 560.

Ogawa T., Y. Tomitaka, A. Nakagawa and
K. Ohshima, 2008. Genetic structure of a population of Potato virus Y inducing potato tuber necrotic ringspot disease in Japan; comparison with North American and European populations. Virus Research, 131, 199-212. <Link>

<2007>
Farzadfar, Sh., Mosahebi, Gh., Ahoonmanesh, A., Koohi, M.,
Ohshima, K., Pourrahim, R., Golnaraghi, A. R. 2007. Distribution and some biological properties of Cauliflower mosaic virus isolates from Iranian cauliflower fields. Applied Entomology and Phytopathology 75: 1‐25.

Farzadfar, Sh., Ahoonmanesh, A., Mosahebi, Gh.,
Ohshima, K., Koohi‐Habibi, M., Pourrahim, R., Golnaraghi, A. R. 2007. Partial biological and molecular characterization of Cauliflower mosaic virus isolates in Iran. Plant Pathology Journal 6: 291‐298.

K. Ohshima, 2007. Turnip mosaic virus. In Characterization, Diagnosis & Management of Plant Viruses. G. P. Rao, P. L. Kumar, Holguin-Pena, R. J. eds., Studium Press LLC, Houston, Texas, USA, 313-330.

Korkmaz, S., S. Onder, Y. Tomitaka and
K. Ohshima, 2007. First report of Turnip mosaic virus on Brassicaceae crops in Turkey. Plant Pathology, 56, 719. (New Disease Reports, On line, 2006) <Link>

Tomitaka, Y., T. Yamashita and
K. Ohshima, 2007. The genetic structure of populations of Turnip mosaic virus in Kyushu and central Honsh, Japan. Journal of General Plant Pathology, 73, 197-208. <Link>

Ohshima, K., Y. Tomitaka, J. T. Wood, Y. Minematsu, H. Kajiyama, K. Tomimura and A. J. Gibbs, 2007.Patterns of recombination in turnip mosaic virus genomic sequences indicate hotspots of recombination. Journal of General Virology, 88, 298-315. <Link>

Gibbs, M. J., P. Wayper, M. L. A. Fourment, J. T. Wood,
K. Ohshima, J. S. Armstrong and A. J. Gibbs, 2007. The variable codons of H3 influenza A virus haemagglutinin genes. Archives of Virology, 152, 11-24. <Link>

<2006>
Tomitaka, Y. and
K. Ohshima, 2006. A phylogeographic study of the Turnip mosaic virus population in east Asia reveals an ‘emergent’ lineage in Japan. Molecular Ecology, 15, 4437-4457. <Link>

大島一里, 2006. 生態学から見た植物ウイルスの拡散:ユーラシア大陸そして九州. 九防協年報2005: 16-21.

<2005>
Farzadfar, Sh.,
K. Ohshima, R. Pourrahim, A. R. Golnaraghi, S. Jalali and A. Ahoonmanesh, 2005. Occurrence of Turnip mosaic virus on ornamental crops in Iran. Plant Pathology, 54, 261. <Link>

Farzadfar, Sh.,
K. Ohshima, R. Pourrahim, A. R. Golnaraghi, S. Sajedi and A. Ahoonmanesh, 2005. Reservoir weed hosts for Turnip mosaic virus in Iran. Plant Disease, 89, 339. <Link>

Tan, Z., A. J. Gibbs, Y. Tomitaka, F. Sanchez, F. Ponz and
K. Ohshima, 2005.Mutations in Turnip mosaic virus genomes that have adapted Raphanus sativus. Journal of General Virology, 86, 501-510. <Link>

<2004>
Tomimura, K., J. Spak, N. Katis, C. E. Jenner, J. A. Walsh, A. J. Gibbs and
K. Ohshima, 2004. Comparisons of the genetic structure of populations of Turnip mosaic virus in West and East Eurasia. Virology, 330(2), 408-423. <Link> Corrigendum<Link

Tan, Z., Y. Wada, J. Chen and
K. Ohshima, 2004. Inter- and intralineage recombinants are common in natural populations of Turnip mosaic virus. Journal of General Virology, 85, 2683-2696. <Link>

Nomura, K.,
K. Ohshima, T. Anai, H. Uekusa and N. Kita, 2004. RNA-silencing of the introduced coat protein gene of Turnip mosaic virus confers the broad spectrum resistance in transgenic Arabidopsis. Phytopathology, 94, 730-736. <Link>

井手洋一・黒木健児・田代暢哉・真籠 洋・吉川信幸・
大島一里, 2004. カンキツに発生するリンゴステムグルービングウイルスの大腸菌発現外被タンパク質に対する抗血清の作製と酵素結合抗体法による診断への利用. 日本植物病理学会報 70, 123-127.

<2003>
Jenner, C. E., X. Wang, K. Tomimura,
K. Ohshima, F. Ponz and J. A. Walsh, 2003. The dual role of the potyvirus P3 protein of Turnip mosaic virus as a symptom and avirulence determinant in Brassicas. Molecular Plant-Microbe Interactions, 16, 777-784. <Link>

Tomimura, K., A. J. Gibbs, C. E. Jenner, J. A. Walsh and
K. Ohshima, 2003. The phylogeny of Turnip mosaic virus; comparisons of 38 genomic sequences reveal a Eurasian origin and a recent 'emergence' in east Asia. Molecular Ecology, 12, 2099-2111. <Link>

大島一里, 2003. 植物ウイルスの進化が見えてきた. 化学と生物, 41巻(2): 125-28.

<2002>
Jenner, C. E., K. Tomimura,
K. Ohshima, S. L. Hughes and J. A. Walsh, 2002. Mutations in Turnip mosaic virus P3 and cylindrical inclusion proteins are separately required to overcome two Brassica napus resistance genes. Virology, 300, 50-59. <Link>

Ohshima, K., Y. Yamaguchi, R. Hirota, T. Hamamoto, K. Tomimura, Z. Tan, T. Sano, F. Azuhata, J. A. Walsh, J. Fletcher, J. Chen, A. Gera and A. Gibbs, 2002. Molecular evolution of Turnip mosaic virus: evidence of host adaptation, genetic recombination and geographical spread. Journal of General Virology, 83, 1511-1521. <Link>

<Before 2001>
Ohshima, K., K. Sako, C. Hiraishi, A. Nakagawa, K. Matsuo, T. Ogawa, E. Shikata and N. Sako, 2000. Potato Tuber Necrotic Ringspot Disease Occurring in Japan: Its Association with Potato virus Y Necrotic Strain. Plant Disease, 10, 1109-1115. <Link> <Photos on Journal Cover>

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